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Jan Funke
Jan Funke
HHMI Janelia Research Campus
Verified email at janelia.hhmi.org - Homepage
Title
Cited by
Year
Connectome-driven neural inventory of a complete visual system
A Nern, F Loesche, S Takemura, LE Burnett, M Dreher, E Gruntman, ...
bioRxiv, 2024
2024
A Bayesian Solution to Count the Number of Molecules within a Diffraction Limited Spot
A Hillsley, J Stein, PW Tillberg, DL Stern, J Funke
bioRxiv, 2024.04. 18.590066, 2024
2024
Towards Generalizable Organelle Segmentation in Volume Electron Microscopy
L Heinrich, W Patton, D Bennett, D Ackerman, G Park, JA Bogovic, ...
Microscopy and Microanalysis 29 (Supplement_1), 975-975, 2023
2023
Network statistics of the whole-brain connectome of drosophila
A Lin, R Yang, S Dorkenwald, A Matsliah, AR Sterling, P Schlegel, S Yu, ...
bioRxiv, 2023
72023
Neuronal wiring diagram of an adult brain
S Dorkenwald, A Matsliah, AR Sterling, P Schlegel, SC Yu, CE McKellar, ...
bioRxiv, 2023
532023
A leaky integrate-and-fire computational model based on the connectome of the entire adult Drosophila brain reveals insights into sensorimotor processing
PK Shiu, GR Sterne, N Spiller, R Franconville, A Sandoval, J Zhou, ...
bioRxiv, 2023
62023
Unpaired Image Enhancement for Neurite Segmentation in x-ray Tomography
JL Rhoades, A Sheridan, M Narwani, B Reicher, M Larson, S Xie, ...
2023 IEEE 20th International Symposium on Biomedical Imaging (ISBI), 1-5, 2023
2023
Publisher Correction: Structured cerebellar connectivity supports resilient pattern separation
TM Nguyen, LA Thomas, JL Rhoades, I Ricchi, XC Yuan, A Sheridan, ...
Nature 614 (7946), E18, 2023
2023
Research briefing
A Sheridan, J Funke
Nature Methods 20, 189-190, 2023
2023
Local shape descriptors for neuron segmentation
A Sheridan, TM Nguyen, D Deb, WCA Lee, S Saalfeld, SC Turaga, ...
Nature methods 20 (2), 295-303, 2023
382023
Hierarchical architecture of dopaminergic circuits enables second-order conditioning in Drosophila
D Yamada, D Bushey, F Li, KL Hibbard, M Sammons, J Funke, ...
Elife 12, e79042, 2023
142023
Structured cerebellar connectivity supports resilient pattern separation
TM Nguyen, LA Thomas, JL Rhoades, I Ricchi, XC Yuan, A Sheridan, ...
Nature 613 (7944), 543-549, 2023
232023
Artificial intelligence gives neuron reconstruction a performance boost
A Sheridan, J Funke
NATURE METHODS, 2023
2023
Model Based Inference of Synaptic Plasticity Rules
Y Mehta, D Tyulmankov, AE Rajagopalan, GC Turner, JE Fitzgerald, ...
bioRxiv, 2023.12. 11.571103, 2023
22023
Neural-circuit basis of song preference learning in fruit flies
K Imoto, Y Ishikawa, Y Aso, J Funke, R Tanaka, A Kamikouchi
bioRxiv, 2023.10. 24.563693, 2023
2023
Unsupervised Learning of Object-Centric Embeddings for Cell Instance Segmentation in Microscopy Images
S Wolf, M Lalit, H Westmacott, K McDole, J Funke
Proceedings of the IEEE/CVF International Conference on Computer Vision …, 2023
12023
A Connectome of the Male Drosophila Ventral Nerve Cord
SY Takemura, KJ Hayworth, GB Huang, M Januszewski, Z Lu, EC Marin, ...
bioRxiv, 2023.06. 05.543757, 2023
282023
Automated reconstruction of whole-embryo cell lineages by learning from sparse annotations
C Malin-Mayor, P Hirsch, L Guignard, K McDole, Y Wan, WC Lemon, ...
Nature biotechnology 41 (1), 44-49, 2023
152023
Discriminative attribution from paired images
N Eckstein, H Bukhari, AS Bates, GSXE Jefferis, J Funke
European Conference on Computer Vision, 406-422, 2022
5*2022
Tracking by Weakly-Supervised Learning and Graph Optimization for Whole-Embryo C. elegans lineages
P Hirsch, C Malin-Mayor, A Santella, S Preibisch, D Kainmueller, J Funke
International Conference on Medical Image Computing and Computer-Assisted …, 2022
22022
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Articles 1–20